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Larry Zipursky Email: zipursky@hhmi.ucla.edu
Biological Chemistry
Office Phone:
(310) 825-2834
Lab Phone:
(310) 206-3750
Office Room:
5784
Office Location:
MRL
Lab Room:
5619, 5629
Lab Location:MRL
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Research Description:
Wiring the Drosophila Visual System
The molecular mechanism regulating the development of the nervous system.
The communication between neurons relies on precise patterns of connections
between them. Our studies have focussed on understanding the molecular
mechanisms by which these connections form during development. To approach this
issue we have been studying the formation of connections in the Drosophila
visual system. This system is well suited to classical and molecular genetic
analysis and behavioral paradigms are available for identifying mutations which
disrupt the formation of neuronal connections.
The formation of neuronal connections in the fly visual system
We have been studying the formation of connections between photoreceptor
neurons (R cells) and their targets in the brain. The compound eye of the fly
contains some 800 simple eyes called ommatidia and each ommatidium contains 8 R
cells. These cells can be divided into three classes based on synaptic
specificity. The R1-R6 neurons form connections in the first optic ganglion of
the fly brain called the lamina. The R7 and R8 neurons extend through the lamina
and make connections in two distinct layers in the second optic ganglion the
medulla.
To dissect the mechanisms regulating connection specificity we have utilized
two different genetic screens. For genes regulating R1-R6 connectivity we
screened for flies defective in motion detection. We screened for R7
connectivity mutants by virtue of defects in their response to ultraviolet (UV)
light. As many connectivity genes may also be necessary for viability or motor
functions used as outputs in these assays, we have chosen to use genetic
techniques that enable us to make the eye, or only a subclass of cells in the
eye, homozygous for randomly induced mutations. By making the entire eye mutant
and testing flies for motion detection we have identified a panel of mutants
affecting R1-R6 connections. Similarly, by generating R7 neurons that are
homozygous mutant and testing their response to UV light, we have identified
mutations disrupting R7 connectivity.
Genes required for R cell target specificity
R1-R6 neurons from the same ommatidium extend axons within a single bundle
into the lamina. During subsequent development each axon projects away from the
bundle and innervates a different group of postsynaptic cells. Each group of
postsynaptic cells is innervated by 6 different R1-R6 neurons from 6 different
ommatidia. These 6 R cells "look"at the same point in space. We have
shown through genetic analysis in which the number and identity of R1-R6 cells
was manipulated that interactions between R1-R6 axons are critical for these
patterns of connections to emerge. Genetic screens have identified a set of
genes required for the formation of these connections. Three have these have
been characterized molecularly and all encode cell surface proteins. They are N-cadherin,
LAR, a receptor tyrosine phosphatase, and a novel cadherin protein called
Flamingo.
Although R1-R6 neurons initially terminate in the lamina largely as they do
in wild type in N-cadherin, Lar and flamingo
mutants, they fail to innervate their correct targets within the lamina. In N-cadherin
and Lar mutants the R1-R6 axons from the same ommatidium remain together
and innervate the same target. In flamingo mutants each R cell axon
extends out from the bundle but innervates inappropriate targets. As both N-cadherin
and Flamingo proteins are homophilic cell adhesion molecules (when these
proteins are on the surface of adjacent cell membranes they bind them together),
they may play an important role in mediating interactions between different R
cell axons or between R cell axons and targets.
N-cadherin and Lar, but not flamingo, were also identified
in genetic screens for R7-mediated behavior. Indeed, by making flies where only
R7 cells were mutant for these genes it was shown that they play a remarkably
specific role on connection specificity. R7 cells lacking N-cadherin or Lar,
where the surrounding R cells and target cells are wild type, connect to the R8
layer rather than projecting more deeply to the R7 layer. Detailed developmental
studies feasible with Lar, but not N-cadherin, revealed that in Lar
mutants R7 axons extend to the R7 target layer initially, but these connections
are unstable resulting in their retraction to the R8 layer. Biochemical studies
in vertebrate neurons support the view that N-cadherin and Lar form a complex
and histological and antibody studies have further suggested that vertebrate
cadherins are important for synapse formation or stability. Our genetic studies
in the fly visual system support the view that Cadherin-mediated processes are
central to the formation of precise patterns of synaptic connections.
Dscam is an axon guidance receptor exhibiting enormous sequence diversity
In the process of dissecting a signal transduction pathway regulating axon
guidance in the larval photoreceptor neurons we, in collaboration with Jack
Dickson’s lab at the University of Michigan, isolated and characterized an
axon guidance receptor called Down Syndrome Cell Adhesion (Dscam). Human Dscam
maps to a region of chromosome 21 associated with Down syndrome and has been
speculated to contribute to brain abnormalities in this syndrome.
Drosophila Dscam acts in conjunction with two well characterized signaling
molecules Dock and Pak to transmit guidance signals to the actin cytoskeleton.
We proposed that in the developing embryo Dscam, Dock and Pak act together to
mediate a short range interaction between a growth cone of an identified neuron,
called Bolwig’s nerve, and a target with which it interacts transiently as it
projects to its final target in the brain. Dscam is also required for normal
patterns of neuronal connections within both the embryonic and postembryonic
central nervous systems.
Multiple forms of Dscam protein are generated through extensive alternative
splicing. These forms all have the same domain structures but differ in amino
acid sequence. The Dscam proteins all have 10 immunoglobulin domains, 6
fibrinectin type III repeats, a transmembrane segment and a cytoplasmic domain
that directly interacts with the signaling protein Dock through both SH2 and SH3
domain interactions. Dscam isoforms differ from each other by the inclusion of
alternative exons that encode for three variable immunoglobulin domains. In
addition, each isoform has one of two different transmembrane domains. Molecular
analysis strongly supports the view that most and perhaps all of the predicted
38,016 isoforms are made in the developing animal. We speculate that these
sequences confer differences in recognition underlying the enormous diversity of
connection specificity. Current efforts are directed towards understanding how
the different isoforms of Dscam contribute to connection specificity in the
developing fly brain and whether different classes of neurons express unique
receptors or a unique spectrum of receptors.
The Drosophila genome contains 3 other Dscam genes, Dscam 2, 3 and 4. They
encode proteins that are predicted to share a common extracellular domain
structure and highly divergent signaling domains. While the prototypical Dscam
and Dscam 4 are expressed in all neurons, Dscam 2 and 3 are expressed in a
subclass of neurons in the central nervous system. Dscam 2,3 and 4 do not appear
to undergo extensive alternative splicing. Biochemical and genetic studies are
in progress to determine the functions of Dscam 2,3 and 4 in regulating the
formations of neuronal connections in Drosophila.
Selected Publications:
Hing, H., Xiao, J., Harden, N., Lim, L. and Zipursky, S.L. (1999) Pak
functions downstream of Dock to regulate photoreceptor axon guidance in
Drosophila. Cell 97, 853-863.
Schmucker, D., Clemens, J.C., Shu, H., Worby, C.A., Xiao, J., Muda, M.,
Dixon, J.E. and Zipursky, S.L. (2000) Drosophila Dscam is an axon
guidance receptor exhibiting extraordinary molecular diversity. Cell 101,
671-684.
Clandinin, T. and Zipursky, S.L. (2000) Afferent growth cone
interactions control synaptic specificity in the Drosophila visual system.
Neuron 28, 427-436.
Lee, C.-H., Herman, T., Clandinin, T.R., Lee, R. and Zipursky, S.L. (2001)
N-cadherin regulates target specificity in the Drosophila visual system. Neuron
30(2), 437-450.
Click for Full list of publications
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